CCIS Post-Proceedings Contents

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Addition for supercomputer functionality
G.G. Stetsyura
V. A. Trapeznikov Institute of Control Sciences of Russian Academy of Sciences, Russia

Experience of Direct Numerical Simulation of Turbulence on Supercomputers
Belyaev K.V.1, Garbaruk A.V.1, Shur M.L.1, Strelets M.Kh.1, Spalart P.R.2
1
Saint-Petersburg Polytechnic University, Russia
2 Boeing Commercial Airplanes, USA

Block Lanczos-Montgomery method with reduced data exchanges
Nikolai Zamarashkin, Dmitry Zheltkov
INM RAS, Russia

Multilevel parallelization: grid methods for solving direct and inverse problems
S. S. Titarenko1, I. M. Kulikov2,3, I. G. Chernykh2, M. A. Shishlenin2,3,4, O. I. Krivorot’ko2,3, D. A. Voronov2,3, and M. Hildyard1
1 School of Earth and Environment, University of Leeds, UK
2 Institute of Computational Mathematics and Mathematical Geophysics SB RAS, Russia
3 Novosibirsk State University, Russia
4 Sobolev Institute of Mathematics SB RAS, Russia

Accelerating assembly operation in element-by-element FEM on multi-core platforms
Sergey Kopysov, Alexander Novikov, Nikita Nedozhogin, Vladimir Rychkov
Institute of Mechanics, Ural Branch of the Russian Academy of Sciences, Russia

Experimental comparison of performance and fault tolerance of software packages Pyramid, X-COM, and BOINC
Anton Baranov, Evgeny Kiselev,  Denis Chernyaev
Joint Supercomputer Center of the Russian Academy of Sciences - Branch of Federal State Institution «Scientific Research Institute for System Analysis of the Russian Academy of Sci-ences», Russia

Internet-Oriented Educational Course “Introduction to Parallel Computing”: A Simple Way to Start
Victor Gergel, Valentina Kustikova
Lobachevsky State University of Nizhni Novgorod, Russia

Layer-by-layer partitioning of finite-element meshes for multi-core architectures
Alexander Novikov, Natalya Piminova, Sergey Kopysov, and Yulia Sagdeeva
Institute of Mechanics, Ural Branch of the Russian Academy of Sciences, Russia

Revised Pursuit Algorithm for Solving Non-Stationary Linear Programming Problems on Modern Computing Clusters with Manycore Accelerators
Irina Sokolinskaya, Leonid Sokolinsky
South Ural State University, Russia

Solving Multidimensional Global Optimization Problems Using Graphics Accelerators
Konstantin Barkalov, Ilya Lebedev
Lobachevsky State University of Nizhny Novgorod, Russia

The Elbrus Platform Feasibility Assessment for High-Performance Computations
Ekaterina Tyutlyaeva, Sergey Konyukhov, Igor Odintsov, Alexander Moskovsky
JSC “RSC Technologies”, Russia

ChronosServer: fast in-situ processing of large multi-dimensional arrays with command line tools
Ramon Antonio Rodriges Zalipynis
National Research University Higher School of Economics, Russia

Supercomputer Simulation of Physicochemical Processes in Solid Fuel Ramjet Design Components for Hypersonic Flying Vehicle
Volokhov V.M., Toktaliev P.D., Martynenko S.I., Yanovskiy L.S., Volokhov A.V., Varlamov D.A.
Institute of Problems of Chemical Physics, Russia

Analysis of processes communication structure for better mapping of parallel applications
K. Bobrik, N. Popova
Moscow State University, Moscow, Russia

Implementation and Evaluation of the PO-HEFT Problem-oriented Workflow Scheduling Algorithm for Cloud Environments
G.I. Radchenko, I.A. Lyzhin, E.A. Nepovinnyh
Department of System Programming, South Ural State University, Russia

Using machine learning methods to detect applications with abnormal efficiency
D.I. Shaykhislamov
Lomonosov Moscow State University, Russia

Parallel algorithms for a 3D photochemical model of pollutant transport in the atmosphere
Alexander V. Starchenko, EvgeniyA. Danilkin, Anastasiya A. Semenova, Andrey A. Bart
National Research Tomsk State University, Russia

Parallel Software for Simulation of Nonlinear Processes in Technical Microsystems
Sergey V. Polyakov, Viktoriia O. Podryga, Dmitry V. Puzyrkov, Tatiana A. Kudryashova
Keldysh Institute of Applied Mathematics of RAS, Russia

Parallel Computation of Normalized Legendre Polynomials using Graphics Processors
Konstantin Isupov, Vladimir Knyazkov, Alexander Kuvaev, and Mikhail Popov
Department of Electronic Computing Machines, Vyatka State University, Russia,

EnOI-based data assimilation technology for satellite observations and ARGO float measurements in a high resolution global ocean model using the CMF platform
M.N. Kaurkin1,2,3, R.A. Ibrayev1,2,3, A.U. Koromyslov4,3
1 Institute of Numerical Mathematics RAS, Russia
2 P.P. Shirshov Institute of Oceanology RAS, Russia
3 Hydrometeorological Centre of Russia, Russia
4 M.V. Lomonosov Moscow State University, Russia

Parallel computational models to estimate an actual speedup of analyzed algorithm
Igor Konshin1,2,3
1 Dorodnicyn Computing Centre of the Russian Academy of Sciences, Russia
2 Institute of Numerical Mathematics of the Russian Academy of Sciences, Russia
3 Lomonosov Moscow State University, Russia

Using simulation for performance analysis and visualization of parallel Branch-and-Bound methods
Y.G. Evtushenko, Y.V. Golubeva, Y.V. Orlov, M.A. Posypkin
Dorodnicyn Computing Centre, FRC CSC RAS, Russia

Numerical model of shallow water: the use of NVIDIA CUDA graphics processors
Tatyana Dyakonova, Alexander Khoperskov, Sergey Khrapov
Volgograd State University, Russia

Parallel Algorithm for Simulation of Fragmentation and Formation of Filamentous Structures in Molecular Clouds
Boris Rybakin1, Nikolai Smirnov1, Valery Goryachev2
1 Department of Gas and Wave Dynamics, Moscow State University, Russia
2 Department of Mathematics, Tver State Technical University, Russia

Dynamics of formation and fine structure of flow pattern around obstacles in laboratory and computational experiment
Yu.D. Chashechkin1, Ya.V. Zagumennyi2, N.F. Dimitrieva2
1 A.Yu. Ishlinskiy Institute for Problems in Mechanics of the RAS, Russia
2 Institute of Hydromechanics of NAS of Ukraine, Ukraine

GPU-accelerated molecular dynamics: energy consumption and performance
V. Vecher1,3, V. Nikolskii2,3, and V. Stegailov3
1 The Moscow Institute of Physics and Technology, Russia
2 National Research University Higher School of Economics, Russia
3 Joint Institute for High Temperatures of Russian Academy of Sciences, Russia

Performance of MD-algorithms on hybrid systems-on-chip Nvidia Tegra K1 & X1
V. Nikolskii1,2, V. Vecher2,3, and V. Stegailov2
1 National Research University Higher School of Economics, Russia
2 Joint Institute for High Temperatures of Russian Academy of Sciences, Russia
3 The Moscow Institute of Physics and Technology, Russia

Techniques for solving large-scale graph problems on heterogeneous platforms
Ilya Afanasyev1, Alexander Daryin2, Jack Dongarra1, Dmitry Nikitenko1, Alexey Teplov1,Vladimir Voevodin1
1 Lomonosov Moscow State University, Russia
2 Yandex.Technology GmbH, Russia